青がαへリックス,赤がβシート.

CLUSTALW Result
   GenomeNet CLUSTALW Server (Kyoto Center) on Mon Aug  2 04:49:19 JST  2004



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 CLUSTAL W (1.81) Multiple Sequence Alignments



Sequence type explicitly set to Protein
Sequence format is Pearson
Sequence 1: sp_TBA_PIG         451 aa
Sequence 2: sp_FTZ1_METJA      364 aa
Start of Pairwise alignments
Aligning...


Sequences (1:2) Aligned. Score: 11.5385
Sequences (2:2) Aligned. Score: 100
Guide tree        file created:   [clustalw.dnd]
Start of Multiple Alignment
There are 1 groups
Aligning...
Group 1:                     Delayed
Sequence:2     Score:2700
Alignment Score 65
CLUSTAL-Alignment file created  [clustalw.aln]
CLUSTAL W (1.81) multiple sequence alignment

sp_TBA_PIG         MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
sp_FTZ1_METJA      MKFLKNVLEEGSKLEEFNELELSPEDKELLEYLQQTKAKITVVGCGGAGNNTITRLKMEG
                   *:   .:    : ::  *        :. ::   *  :. *: * ..: *. ::.     
                   

sp_TBA_PIG         HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
sp_FTZ1_METJA      -------IEGAKTVAINTDAQQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAKESAE
                          ::   **  :. :    :    :::: **: : .  * *: .**:*  .   :
                          

sp_TBA_PIG         RIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
sp_FTZ1_METJA      EIKAAIQDSD---MVFITCGLGGGTGTGSAPVVAEIS----KKIGALTVAVVTLPFVMEG
                   .*:   ::.     . :  .:*****:* :.:: *       * . * .:: . * *  .
                   

sp_TBA_PIG         VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
sp_FTZ1_METJA      KVRMKNAMEGLERLKQHTDTLVVIPNEKLFEIVP-NMPLKLAFKVADEVLINAVKG-LVE
                    *.  *::   .   :*:*  .:: ** :::*   *: :: .  .  : **. : . :. 
                    

sp_TBA_PIG         SLRFDGALNVDLTEFQTNLVPYPRAHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
sp_FTZ1_METJA      LITKDGLINVDFADVKAVMNNGGLAMIGIGESDSEKRAKEAVSMALNSPLLDVDIDGATG
                    :  ** :***:::.:: :     * : :.   .   *::*    *. . :      .:.
                    

sp_TBA_PIG         QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYEPP
sp_FTZ1_METJA      ALIHVMGPE------------DLTLEEAREVVATVSSR------------------LDPN
                    :::    .            *:. ::.. .:**:.::                   :* 
                    

sp_TBA_PIG         TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
sp_FTZ1_METJA      ATIIWG--------------------------ATIDENLENTVRVLLVITGVQSRIEFTD
                   :.:  *                           .:*    : . *   :    .. **::
                   

sp_TBA_PIG         AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
sp_FTZ1_METJA      T----GLKRKKLELTGIPKI-----------
                   :    .  .*. * .*: .:           
                   
(sp_TBA_PIG:0.44231,sp_FTZ1_METJA:0.44231);