青がαへリックス,赤がβシート. CLUSTALW Result GenomeNet CLUSTALW Server (Kyoto Center) on Mon Aug 2 04:49:19 JST 2004 -------------------------------------------------------------------------------- CLUSTAL W (1.81) Multiple Sequence Alignments Sequence type explicitly set to Protein Sequence format is Pearson Sequence 1: sp_TBA_PIG 451 aa Sequence 2: sp_FTZ1_METJA 364 aa Start of Pairwise alignments Aligning... Sequences (1:2) Aligned. Score: 11.5385 Sequences (2:2) Aligned. Score: 100 Guide tree file created: [clustalw.dnd] Start of Multiple Alignment There are 1 groups Aligning... Group 1: Delayed Sequence:2 Score:2700 Alignment Score 65 CLUSTAL-Alignment file created [clustalw.aln] CLUSTAL W (1.81) multiple sequence alignment sp_TBA_PIG MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK sp_FTZ1_METJA MKFLKNVLEEGSKLEEFNELELSPEDKELLEYLQQTKAKITVVGCGGAGNNTITRLKMEG *: .: : :: * :. :: * :. *: * ..: *. ::. sp_TBA_PIG HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD sp_FTZ1_METJA -------IEGAKTVAINTDAQQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAKESAE :: ** :. : : :::: **: : . * *: .**:* . : sp_TBA_PIG RIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA sp_FTZ1_METJA EIKAAIQDSD---MVFITCGLGGGTGTGSAPVVAEIS----KKIGALTVAVVTLPFVMEG .*: ::. . : .:*****:* :.:: * * . * .:: . * * . sp_TBA_PIG VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA sp_FTZ1_METJA KVRMKNAMEGLERLKQHTDTLVVIPNEKLFEIVP-NMPLKLAFKVADEVLINAVKG-LVE *. *:: . :*:* .:: ** :::* *: :: . . : **. : . :. sp_TBA_PIG SLRFDGALNVDLTEFQTNLVPYPRAHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN sp_FTZ1_METJA LITKDGLINVDFADVKAVMNNGGLAMIGIGESDSEKRAKEAVSMALNSPLLDVDIDGATG : ** :***:::.:: : * : :. . *::* *. . : .:. sp_TBA_PIG QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYEPP sp_FTZ1_METJA ALIHVMGPE------------DLTLEEAREVVATVSSR------------------LDPN ::: . *:. ::.. .:**:.:: :* sp_TBA_PIG TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE sp_FTZ1_METJA ATIIWG--------------------------ATIDENLENTVRVLLVITGVQSRIEFTD :.: * .:* : . * : .. **:: sp_TBA_PIG AREDMAALEKDYEEVGVDSVEGEGEEEGEEY sp_FTZ1_METJA T----GLKRKKLELTGIPKI----------- : . .*. * .*: .: (sp_TBA_PIG:0.44231,sp_FTZ1_METJA:0.44231);